Bacdiver: Client For The Dsmz'S Bacterial Diversity Metadatabase Dataset uri icon

abstract

  • This R package provides a programmatic interface for the Bacterial Diversity Metadatabase (Söhngen et al. 2014 & 2016 ) of the DSMZ (German Collection of Microorganisms and Cell Cultures). BacDiveR helps you to conduct your microbial research better and faster, by: downloading the BacDive datasets you want to investigate off-line, and by providing you with a way to document and report your searches and downloads in a reproducible manner (.R scripts, .Rmd files, etc.). See TIBHannover.GitHub.io/BacDiveR for more details, /news for the changelog, and GitHub.com/TIBHannover/BacDiveR for the latest source code.

publication date

  • 2018