selected publications

• academic article

  • Comparison between computerised lung SPECT-CT and noncontrast thoracic HRCT for quantitative analysis of post-acute COVID-19 pulmonary vascular pruning.  ERJ Open Research.  9:00076-2023. 2023
  • Correction to: Comparison of optimization parametrizations for regional lung compliance estimation using personalized pulmonary poromechanical modelling.  Biomechanics and Modeling in Mechanobiology.  22:1459-1459. 2023
  • Comparison of optimization parametrizations for regional lung compliance estimation using personalized pulmonary poromechanical modeling.  Biomechanics and Modeling in Mechanobiology.  22:1541-1554. 2023
  • Artificial intelligence workflow quantifying muscle features on Hematoxylin–Eosin stained sections reveals dystrophic phenotype amelioration upon treatment.  Scientific Reports.  12. 2022
  • Estimation of Regional Pulmonary Compliance in Idiopathic Pulmonary Fibrosis Based on Personalized Lung Poromechanical Modeling.  Journal of Biomechanical Engineering.  144. 2022
  • Personalized pulmonary poromechanics.  Computer Methods in Biomechanics & Biomedical Engineering.  23:S119-S120. 2020
  • A Generic Approach for Efficient Detection of Vascular Structures.  IRBM.  41:304-315. 2020
  • Quantitative computed tomography imaging of airway remodeling in severe asthma..  HAL (Le Centre pour la Communication Scientifique Directe).  6:76-83. 2016
  • Development and Analysis of Patient-Based Complete Conducting Airways Models.  PLoS ONE.  10:e0144105-e0144105. 2015
  • Computed Tomography Assessment of Airways Throughout Bronchial Tree Demonstrates Airway Narrowing in Severe Asthma.  Academic Radiology.  22:734-742. 2015
  • Clinical validation of a CT-based impulse oscillometry model 2014
  • Comparing algorithms for automated vessel segmentation in computed tomography scans of the lung: the VESSEL12 study.  Medical Image Analysis.  18:1217-1232. 2014
  • Volumetric Quantification of Airway Wall in CT via Collision-Free Active Surface Model: Application to Asthma Assessment.  IEEE Transactions on Medical Imaging.  33:1512-1526. 2014
  • Relationship between the airway wall area and asthma control score in moderate persistent asthma.  European Radiology.  23:1594-1602. 2013
  • Extraction of Airways From CT (EXACT'09).  IEEE Transactions on Medical Imaging.  31:2093-2107. 2012
  • Multidetector Row Computed Tomography to Assess Changes in Airways Linked to Asthma Control.  Respiration.  81:461-468. 2010
  • CT imaging of chronic obstructive pulmonary disease: role in phenotyping and interventions.  Expert Opinion on Medical Diagnostics.  3:689-703. 2009
  • Investigation of airways using MDCT for visual and quantitative assessment in COPD patients.  International Journal of COPD.  Volume 3:97-107. 2008
  • The effect of hypertonic saline on cerebral contusion after traumatic brain injury: a tomodensitometric study.  European Journal of Anaesthesiology.  22:24-24. 2005
  • An image-based computational model of oscillatory flow in the proximal part of tracheobronchial trees.  Computer Methods in Biomechanics & Biomedical Engineering.  8:279-293. 2005
  • Simulateur morphofonctionnel des voies aériennes supérieures et proximales.  ITBM-RBM.  26:72-77. 2004
  • Correction to 'Pulmonary Airways: 3-D Reconstruction From Multislice CT and Clinical Investigation'.  IEEE Transactions on Medical Imaging.  23:1563-1563. 2004
  • Pulmonary Airways: 3-D Reconstruction From Multislice CT and Clinical Investigation.  IEEE Transactions on Medical Imaging.  23:1353-1364. 2004
  • Multidetector-row CT of the airways.  Seminars in Roentgenology.  38:146-157. 2003

• chapter

  • Large airway disease and chronic airflow obstruction.  . 2020
  • 3D Vector Flow Guided Segmentation of Airway Wall in MSCT.  Lecture notes in computer science. 302-311. 2010
  • Diffuse Parenchymal Lung Diseases: 3D Automated Detection in MDCT.  Springer eBooks. 825-833. 2007
  • Assessment of Airway Remodeling in Asthma: Volumetric Versus Surface Quantification Approaches.  Lecture notes in computer science. 413-420. 2006
  • Multi-Detector-Row CT of the Airways.  Springer eBooks. 63-80. 2005
  • Computed Tomography: Introduction to CT Imaging.  CRC Press eBooks. 49-68. 2005
  • CT Hepatic Venography: 3D Vascular Segmentation for Preoperative Evaluation.  Lecture notes in computer science. 830-837. 2005
  • Large Airways at CT: Bronchiectasis, Asthma and COPD.  Medical radiology. 39-54. 2004
  • Physiopathology of Pulmonary Airways: Automated Facilities for Accurate Assessment.  Lecture notes in computer science. 234-242. 2004

• conference paper

  • Hybrid Methodology Using Electroencephalogram and Eye-tracking for Virtual Reality Design and Optimization.  2022 IEEE International Symposium on Mixed and Augmented Reality Adjunct (ISMAR-Adjunct). 443-446. 2024
  • Controller Evaluation for Earthwork Teleoperation and Training in Virtual Reality.  . 1-6. 2024
  • Linking CT and SPECT based analysis for quantitative follow-up of vascular perfusion defects in COVID-19.  Medical Imaging 2018: Computer-Aided Diagnosis. 12-12. 2023
  • Industrial Use-Case : Digital Twin for Autonomous Earthwork in Virtual-Reality.  . 1-4. 2022
  • Personalized pulmonary poromechanics in health, idiopathic pulmonary fibrosis and CoViD-19.  . 2022
  • Traction bronchiectasis identification and quantitative biomarkers for follow up in nonspecific interstitial pneumonia.  Medical Imaging 2018: Computer-Aided Diagnosis. 26-26. 2021
  • Transferring CT image biomarkers from fibrosing idiopathic interstitial pneumonia to COVID-19 analysis.  Medical Imaging 2018: Computer-Aided Diagnosis. 2021
  • Diffusion-based interpolation with geometrical constraints applied to investigation of interstitial lung diseases.  . 622-629. 2020
  • Estimation of patient-specific mechanical parameters in pulmonary diseases.  HAL (Le Centre pour la Communication Scientifique Directe). 2020
  • Mécanique pulmonaire personnalisée : modélisation et estimation - Application à la fibrose pulmonaire.  . 2019
  • Efficient detection of vascular structures using locally connected filtering.  Medical Imaging 2018: Computer-Aided Diagnosis. 61-61. 2019
  • Deep learning framework for infiltrative lung disease classification.  . 2018
  • Boosting CNN performance for lung texture classification using connected filtering.  Medical Imaging 2018: Computer-Aided Diagnosis. 4-4. 2018
  • Robust lung identification in MSCT via controlled flooding and shape constraints: dealing with anatomical and pathological specificity.  Proceedings of SPIE, the International Society for Optical Engineering/Proceedings of SPIE. 97881A-97881A. 2016
  • Increasing CAD system efficacy for lung texture analysis using a convolutional network.  Proceedings of SPIE, the International Society for Optical Engineering/Proceedings of SPIE. 97850Q-97850Q. 2016
  • Grading remodeling severity in asthma based on airway wall thickening index and bronchoarterial ratio measured with MSCT.  Proceedings of SPIE, the International Society for Optical Engineering/Proceedings of SPIE. 941515-941515. 2015
  • On-line scalable image access for medical remote collaborative meetings.  Proceedings of SPIE, the International Society for Optical Engineering/Proceedings of SPIE. 94180C-94180C. 2015
  • 3D mapping of airway wall thickening in asthma with MSCT: a level set approach.  Proceedings of SPIE, the International Society for Optical Engineering/Proceedings of SPIE. 90352I-90352I. 2014
  • An automated approach for single-cell tracking in epifluorescence microscopy applied to E. coli growth analysis on microfluidics biochips.  Proceedings of SPIE, the International Society for Optical Engineering/Proceedings of SPIE. 83170Z-83170Z. 2012
  • Idiopathic interstitial pneumonias and emphysema: detection and classification using a texture-discriminative approach.  Proceedings of SPIE, the International Society for Optical Engineering/Proceedings of SPIE. 83152Z-83152Z. 2012
  • A unified approach for high throughput analysis of real-time biomolecular interactions in surface plasmon resonance and fluorescence imaging.  Proceedings of SPIE, the International Society for Optical Engineering/Proceedings of SPIE. 79651A-79651A. 2011
  • High-throughput morphometric analysis of pulmonary airways in MSCT via a mixed 3D/2D approach.  Proceedings of SPIE, the International Society for Optical Engineering/Proceedings of SPIE. 79631R-79631R. 2011
  • Surface modeling and segmentation of the 3D airway wall in MSCT.  Proceedings of SPIE, the International Society for Optical Engineering/Proceedings of SPIE. 79640O-79640O. 2011
  • Airway shape assessment with visual feed-back in asthma and obstructive diseases.  Proceedings of SPIE, the International Society for Optical Engineering/Proceedings of SPIE. 76251E-76251E. 2010
  • Ground truth and CT image model simulation for pathophysiological human airway system.  Proceedings of SPIE, the International Society for Optical Engineering/Proceedings of SPIE. 76252K-76252K. 2010
  • A morphological-aggregative approach for 3D segmentation of pulmonary airways from generic MSCT acquisitions.  HAL (Le Centre pour la Communication Scientifique Directe). 2009
  • Analysis of bronchial bifurcations in severe obstructive lung disease using 2D multiplanar reconstructions and 3D segmentation of bronchial lumina with colour calibre coding (BronCare).  . 2009
  • Detection and classification of interstitial lung diseases and emphysema using a joint morphological-fuzzy approach.  Proceedings of SPIE, the International Society for Optical Engineering/Proceedings of SPIE. 726031-726031. 2009
  • Morpho-geometrical approach for 3D segmentation of pulmonary vascular tree in multi-slice CT.  Proceedings of SPIE, the International Society for Optical Engineering/Proceedings of SPIE. 72594F-72594F. 2009
  • Quantification of macromolecular interactions using SPR detection.  HAL (Le Centre pour la Communication Scientifique Directe). 2008
  • 3D bronchial simulator: automatic generation of volumetric CT images for assessment of bronchial parameter quantification methods.  Proceedings of SPIE, the International Society for Optical Engineering/Proceedings of SPIE. 69180Y-69180Y. 2008
  • Automatic quantification of bronchi using MDCT: Comparison of FWHM and EDCE methods on computerized simulations and in vivo bronchi.  HAL (Le Centre pour la Communication Scientifique Directe). 2006
  • Airflow modeling in a CT-scanned human airway geometry.  HAL (Le Centre pour la Communication Scientifique Directe). 2004
  • 3D-Modeling of human bronchial tree in HRCT.  . 2000